BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038C06SP1|AL430512
(959 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1472 1803 0.0
>3x_Contig1472
Length = 10822
Score = 1803 bits (907), Expect = 0.0
Identities = 951/963 (98%), Gaps = 4/963 (0%)
Strand = Plus / Plus
Query: 1 accaaaaatttggtggggagggcgccatttgccttaagatcaggtgcagtgagactgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7438 accaaaaatttggtggggagggcgccatttgccttaagatcaggtgcagtgagactgcaa 7497
Query: 61 agttcttcatcaaaggctagttccagcgatgagtccaatgctataaaaggcgagaatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7498 agttcttcatcaaaggctagttccagcgatgagtccaatgctataaaaggcgagaatggt 7557
Query: 121 gaagaattacaatctgtggatgtag-cagcgg-ctcgtcaatcggaatttaacggg-agt 177
||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||
Sbjct: 7558 gaagaattacaatctgtggatgtaggcagcgggctcgtcaatcggaatttaacggggagt 7617
Query: 178 wtatctcagcttttacatcaggcaatgaacacaccaatagaagagttaggagatctggaa 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7618 atatctcagcttttacatcaggcaatgaacacaccaatagaagagttaggagatctggaa 7677
Query: 238 accaagttgaagtcgccattgactgagaaagaacaacaattggatgagaaattgactgca 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7678 accaagttgaagtcgccattgactgagaaagaacaacaattggatgagaaattgactgca 7737
Query: 298 tttttgaggaagtactcgaaatataacaaagttttagatctaccagaggataccaacaag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7738 tttttgaggaagtactcgaaatataacaaagttttagatctaccagaggataccaacaag 7797
Query: 358 ttcgactttagttcaaaagttttgtcccaaccattacatactagagagttcccatatttg 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7798 ttcgactttagttcaaaagttttgtcccaaccattacatactagagagttcccatatttg 7857
Query: 418 tcgcacaccagttaagaaaagccttattcggaacaagaattatatgtwcgtcaattaaaa 477
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 7858 tcgcacaccagtaaagaaaagccttattcggaacaagaattatatgtacgtcaattaaaa 7917
Query: 478 catgccgctcatacatccaaattaggtgctaatatacaagacgtgtatttcccacacaag 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7918 catgccgctcatacatccaaattaggtgctaatatacaagacgtgtatttcccacacaag 7977
Query: 538 gacgttttcaacccgccatctttacagcaagtatccattgawaagctaatggccgctggt 597
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 7978 gacgttttcaacccgccatctttacagcaagtatccattgaaaagctaatggccgctggt 8037
Query: 598 gtacatttgggccaatccactgctctatggagagcttctacacaaccatatatttacggt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8038 gtacatttgggccaatccactgctctatggagagcttctacacaaccatatatttacggt 8097
Query: 658 gaatacaagggcattcatatcattgatttgaatcaaacactttcgcatttgaagagagct 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8098 gaatacaagggcattcatatcattgatttgaatcaaacactttcgcatttgaagagagct 8157
Query: 718 gcacaggtcgtagaaggtgttgctgaaaatggtggtttgattcttttccttgggaccaga 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8158 gcacaggtcgtagaaggtgttgctgaaaatggtggtttgattcttttccttgggaccaga 8217
Query: 778 gagggtcaaaagagaactttaattaaggcagctgaaagagtaaacggttattatgtggca 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8218 gagggtcaaaagagaactttaattaaggcagctgaaagagtaaacggttattatgtggca 8277
Query: 838 tctaagtgggtaccaggtactttgaccaatcctactgaaatttcaagtagttgggaaaga 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8278 tctaagtgggtaccaggtactttgaccaatcctactgaaatttcaagtagttgggaaaga 8337
Query: 898 cacgaggart-ttatttcggtaacccaaccggtagagaattgactcttaacgaatctatg 956
||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8338 cacgaagtggattatttcggtaacccaaccggtagagaattgactcttaacgaatctatg 8397
Query: 957 agc 959
|||
Sbjct: 8398 agc 8400
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6626
Number of Sequences: 1807
Number of extensions: 6626
Number of successful extensions: 53
Number of sequences better than 1.0e-20: 1
length of query: 959
length of database: 10,358,551
effective HSP length: 16
effective length of query: 943
effective length of database: 10,329,639
effective search space: 9740849577
effective search space used: 9740849577
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)